Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Nicotiana tabacum

CDS Sequence

CDS ID	lcl\|NW_015941028.1_cds_XP_016485055.1_76023
CDS Infomation	[gene=LOC107805514] [db_xref=GeneID:107805514] [protein=paired amphipathic helix protein Sin3-like 2] [protein_id=XP_016485055.1] [location=complement(join(30239..30376,30651..30762,31718..31881,31997..32149,32250..32388,32474..32571,32693..33289,33377..33481,33808..33993,34081..34163,34764..35342,36245..36499,36609..36802,37113..37242,37388..37417,37499..37574,37894..38030,38502..38787,38883..39053,39136..39234,39340..39523,39621..39833,40914..40987))] [gbkey=CDS]
Sequence	ATGAAGCGATTACGGGATGATGTTTATGCTAATCCTCAATTCAAGCGCCCATTTGGTTCT TCTCGTGGAGAATCATACGGCCAATCACAGGTTCCTGGAAGTGGCGCTGGCGGCGGAGGC AATAGTGTTGGCGGTACTGGAGGGGGTGTTGGTGCCAGTGCTAGCACCCAAAAGTTGACA ACTAATGATGCATTGTCTTATTTGAAGGAAGTTAAGGACATGTTTCAAGACCAAAGGGAG AAGTATGACTTGTTCCTTGATGTTATGAAAGACTTTAAGGCTCAAAGAATTGACACTTCC GGTGTCATAGCAAGAGTAAAAGATTTGTTTAAAGGGCATCCAAATTTGATCCTTGGGTTC AATACTTTCTTGCCCAAGGGCTATGAAATAACCCTCACTGAAGAAGAGGAGGCTCCTCCA AAGAAAACAGTTGAGTTTGAAGAAGCTATCAGCTTTGTGAACAAAATAAAGAAACGTTTC CAAAATGATGATCACGTGTACAAGTCTTTCTTAGACATTTTGAACATGTATAGGAAGGAA CACAAGGGCATTACTGAGGTGTACCAGGAGGTTGCAGCACTTTTTGAAGACCATCCTGAT TTGCTGGATGAGTTCACGAGATTCTTGCCAGATTCTTCAGCTACTGCATCAGCAACACAG ACTTCATTGGGCCGACCTTCTTTCCATCGTTATGATGAGAGGAGCTCTGCTACATTGCTT CGGCAACCACACACGGACAAGCAACGTTTCCGCCGGGATAGGATTATCAGTCCTCATGCA GAACGTGATCCTAGTGCTGAACGCCCTGAGATGGACGATGATAAATCAATGATAAAGTTG CATAAAGAGCAAAAGAGGCGTGCTGAAAAAGAGAACAGGGACCGCAGAAGTCGCGATCAG GATTATAGAGAACCTGATAATGAGAATAATGGAGATATAAGCATGCTCCGCATTGCTGAT AAAAGAAAATCTGCTCGGAAGGTTGAAGAGTTCGGAGGCACTTACGATGATAAAGATGGC GTGAAAAATATGTATAGCCAAGAGTTCACTTTCTGTGAAAGAGTAAAGGAGAGACTACGC AGTCCAACTGATTACCAGGCATTCCTAAAGTGCCTCCATATTTATAGTACAGAAATAATT AGCAGAAAGGAGTTACAAAGTTTGGTTGCTGATTTACTTGGAAAGCATCCTGATCTTATG GAGGGATTCTATGAATTCTTGGAGCGCTGTGAACGAATTGATGGATATCTCGCAGGTGTT ATGAGCAACAAATCTTTGTGGAATGAAGGGCATACATCAAAGTCAGTGAAGGAGGAGGAG AAAGACAAAGAACAGAAGCGTGAAATTGATGGAGGTAAAGAAAAGGACCGGTACAAGGAG AAATACTGGGGAAAGTNTAGGCTTGCCTTTAGTGGTTATCTTCTGCATTTTATCAATGAT GGTTTGTTGCATTCTGTTAACATCAGGTTTGAGCTAGACATGTTATTGGAGTCAGTGAGT TCAACTGCTAAGCGTGCAGAAGAGTTGTTGAATGCCCTTAATGATAATTCAGTTGGTGTG GATGGCCCAATCCGCATCGAAGACCACTTCACAGCACTGAATTTAAGGTGCATTGAACGT CTCTATGGTGACCATGGCCTGGATGTGATGGACATTTTGCGGAAAAACCCACCTCTTGCT CTGCCTGTTGTATTTACCCGCTTGAAGCAGAAACAGGAGGAGTGGACGAAGTGTCGCTCA GACTTCAACAGAGTTTGGGCTGAAATTTATTCTAAGAACCATTACAAGTCGCTTGACCAC CGAAGTTTCTATTTCAAGCAACAAGATTCAAAGAACCTTAGCACAAAATCCTTAGTAGCG GAGATCAAAGAAATTAAGGAGAAAAAGCAGAAAGAAGATGACATGATTCTTGCTATTGCC GCTGGTAGTAGACGTCCAATAAGCCCTCATCTTGAATTTGAATTTGCTGATTCTGATGTT CACGAAGACATGTACAAACTTATCAAGTATTCTTGTGAAGAGGTTTGTTCCACAGAAGAG CAGTTAAATAAAGTTCTGAGGCTGTGGACCACCTTTCTTGAGCCAATCTTTGGTGTTCCT TATCGTCATCATGGCTCTGAGGCTACTGGCGACGATGTCTTGTCAAAGTATCATGGTTTG AAGAGCAATGGAACAAGCATTGGCGAAAGTGATAGAAGTCCAAGTGCAGATGTTACCACT ACTAAGTCTAAGCAATCAAAAGATATCTGCAACGGAGATGCAAATTCTTCCCCTCAACGG CTAAATTCTTCCAGGGCAATCTTCACTAATACAGATGCTTGCCCCAAGGAAGATGGATTA GCAGTAGCTGGTGAACGCTTACTTAGTTCTGATGCAGTTGCTACCCTCGGAGCAGATAAT GCTTGTGCAAGATTGGAAAGTACTTCAGGCCGCGGCACACGACCTGGTAATGACGCTGCT GAGGATGGCCTAGGAGCGAAGTCTAATACTGATAATGTGCCAATTTCAGAGGGTGGCACT TCAAGATCACTACCCTTGGCAAATGGCGGATTTGCTGAAGGTTCTAGAATTGATGGGTTT AATGCTGATTCTGTTGATCCCTCTAAAAATGAGAAAGAAGAAGGTGAGTTGTCGCCTAAT CAGGATTTTGAACAGGACAATTTTGTTGGCTTTCGAGATGGTGCCGCATGCAAANAGAAA CTGATGTTTGTTTATCCAGGCCGCGGCACACGACCTGGTAATGACGCTGCTGAGGATGGC CTAGGAGCGAAGTCTAATACTGATAATGTGCCAATTTCAGAGGGTGGCACTTCAAGATCA CTACCCTTGGCAAATGGCGGATTTGCTGAAGGTTCTAGAATTGATGGGTTTAATGCTGAT TCTGTTGATCCCTCTAAAAATGAGAAAGAAGAAGGTGAGTTGTCGCCTAATCAGGATTTT GAACAGGACAATTTTGTTGGCTTTCGAGATGGTGCCGCATGCAAAGGAAATATGCAATAT CAATCTGGAGGTGCTGAAATGGTTGGTTGTCAGGATACTGCTGGTGAAAACGATGCAGAT GCTGACGTTGAAGATAGTGAAAATGTTTCCGAGGCCGGAGATGTTTCAGGTAGTGAGTCT GCTGCTGATGAGTGCTCTCGGGAGGAGCATGAGGAAGAAGACGATGGAGAACATGACGAG CTTGATGGTAAAGTTGAGAGTGAAGGTGAGGCTGAGGGCACGAGTGAAGCAAACTTTGTT GCAGGTGATGCCACTGTGCTTCAAATGTCTGAACGTTTCTTGCTTACTTCAAAGCCTCTT GCTAAACATGTGGTTTCACCTCATTGTGGGGGTGCAAAGAACGACCTTCGAGTCTTTTAT GGAAATGACGACTTTTATGTGCTTTTTAGGCTTCATCAGAATTTGTATGAAAGGTTATTA TCGGCAAAGCTGAATGCAGCATCATCTGAATCAAAGTGGAGAACTGGAGAGGATACTGGT TCTGATCCATATGCCAGATTCATGAGTGCACTGTATAGTTTGCTAGATGGATCTGCAGAT AATGCAAAGTTTGAGGATGATTGCCGATCAATCATTGGGAATCAGTCTTATGTGCTATTT ACTTTGGACAAACTGATATATAAACTGGTCAAGCAGCTTCAAACTGTTTCAAGTGATGAG CTAGACGGTAAGCTGCTTCAGTTATATGAATATGAAAGGTCACGGAAACCTGAGAAGTAT GTCGATTCAGTTTATTACGAAAATGCTCATGTCCTCCTCCATGAGGAGAACATTTACCGG TTTGAAAGTACATCTTCCCCAACTCGTGTGTCTATCCAGTTCATGGATGATGGAAGTGAG AAGTCTGAAGTTGTTGCAGTTTATGTAGACCCCAATTTTGCTGGTTATCTATATAATGAT TATCTATCTGTTGAACATGGGAAGAAAGAATCGTCAGCAGTTATGCTGAAGAGAAACAAG AGAAAACATACTGACCATGACGTATCTTCTGCCCTGTGCATGGTGAGGGAAAATATTATA CTCGTAAATGGCTTGGAGTGTAAGATGGCTTCAAATTCATCAAAGATTTCTTACGTACTG GACACAGAGGACTTCTTTTACCGTCTTGGAAGGAAAAGAAAAAAGATTTCGGCTGGCAGA TTATTGTGGCATGGCCAGGCGAGAGTAGCACGCTTCCACCGTGTTTTGACATCCTCGTTA TGA

Peptide Sequence

PEP ID	XP_016485055.1
PEP Infomation	PREDICTED: paired amphipathic helix protein Sin3-like 2 [Nicotiana tabacum]
Sequence	MKRLRDDVYANPQFKRPFGSSRGESYGQSQVPGSGAGGGGNSVGGTGGGVGASASTQKLT TNDALSYLKEVKDMFQDQREKYDLFLDVMKDFKAQRIDTSGVIARVKDLFKGHPNLILGF NTFLPKGYEITLTEEEEAPPKKTVEFEEAISFVNKIKKRFQNDDHVYKSFLDILNMYRKE HKGITEVYQEVAALFEDHPDLLDEFTRFLPDSSATASATQTSLGRPSFHRYDERSSATLL RQPHTDKQRFRRDRIISPHAERDPSAERPEMDDDKSMIKLHKEQKRRAEKENRDRRSRDQ DYREPDNENNGDISMLRIADKRKSARKVEEFGGTYDDKDGVKNMYSQEFTFCERVKERLR SPTDYQAFLKCLHIYSTEIISRKELQSLVADLLGKHPDLMEGFYEFLERCERIDGYLAGV MSNKSLWNEGHTSKSVKEEEKDKEQKREIDGGKEKDRYKEKYWGKXRLAFSGYLLHFIND GLLHSVNIRFELDMLLESVSSTAKRAEELLNALNDNSVGVDGPIRIEDHFTALNLRCIER LYGDHGLDVMDILRKNPPLALPVVFTRLKQKQEEWTKCRSDFNRVWAEIYSKNHYKSLDH RSFYFKQQDSKNLSTKSLVAEIKEIKEKKQKEDDMILAIAAGSRRPISPHLEFEFADSDV HEDMYKLIKYSCEEVCSTEEQLNKVLRLWTTFLEPIFGVPYRHHGSEATGDDVLSKYHGL KSNGTSIGESDRSPSADVTTTKSKQSKDICNGDANSSPQRLNSSRAIFTNTDACPKEDGL AVAGERLLSSDAVATLGADNACARLESTSGRGTRPGNDAAEDGLGAKSNTDNVPISEGGT SRSLPLANGGFAEGSRIDGFNADSVDPSKNEKEEGELSPNQDFEQDNFVGFRDGAACKXK LMFVYPGRGTRPGNDAAEDGLGAKSNTDNVPISEGGTSRSLPLANGGFAEGSRIDGFNAD SVDPSKNEKEEGELSPNQDFEQDNFVGFRDGAACKGNMQYQSGGAEMVGCQDTAGENDAD ADVEDSENVSEAGDVSGSESAADECSREEHEEEDDGEHDELDGKVESEGEAEGTSEANFV AGDATVLQMSERFLLTSKPLAKHVVSPHCGGAKNDLRVFYGNDDFYVLFRLHQNLYERLL SAKLNAASSESKWRTGEDTGSDPYARFMSALYSLLDGSADNAKFEDDCRSIIGNQSYVLF TLDKLIYKLVKQLQTVSSDELDGKLLQLYEYERSRKPEKYVDSVYYENAHVLLHEENIYR FESTSSPTRVSIQFMDDGSEKSEVVAVYVDPNFAGYLYNDYLSVEHGKKESSAVMLKRNK RKHTDHDVSSALCMVRENIILVNGLECKMASNSSKISYVLDTEDFFYRLGRKRKKISAGR LLWHGQARVARFHRVLTSSL

Transcript Sequence

Gene sequence data has not been registered.